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Complete Solution for Bottom-Up Proteomics

PEAKS® Studio 13 offers a complete bottom-up proteomics solution with increased accuracy, sensitivity, and speed. Updated workflows for a variety of applications, such as in depth canonical and non-canonical peptide and protein identifications, make PEAKS® a unique solution. From DDA to DIA data support, PEAKS® Studio 13 provides a comprehensive solution to bring your research to new heights!

powerful software used for proteomics analysis, particularly in mass spectrometry. PEAKS Studio is widely used for tasks like protein identification, quantification, and analysis of post-translational modifications (PTMs). The software supports a variety of analysis types, such as de novo sequencing, database searching, and spectral library searching.
PEAKS Studio 13.0 would likely include improvements in features like:

• Advanced peptide and protein identification: More sensitive and accurate algorithms for identifying proteins from mass spectrometry data.
  
• Post-translational modification analysis: More options for identifying and quantifying modifications like phosphorylation or glycosylation.
  
• Improved user interface: With every version, user experience tends to improve, making complex workflows easier to navigate.
  
• Enhanced integration with databases: To make searching and annotating proteins even more streamlined.
  

PEAKS Studio 13 Is Here

Smarter Workflows, Deeper Discovery

We’re proud to introduce PEAKS Studio 13, the latest evolution of our proteomics software platform. This release brings powerful new features and workflow improvements that make it easier than ever to get fast, accurate, and meaningful results from both DDA and DIA data.

 

1. Streamlined Workflows for DDA and DIA
   Workflows have been fully redesigned for a smoother, more flexible user experience. You can now choose where to end your analysis or add more steps later without starting over.
   
2. Unmatched DIA Performance
   PEAKS DIA is faster and more accurate, with better sensitivity and sequence variant detection. Whether using CPU or GPU, processing times are shorter and results are deeper.
   
3. Full Result Transparency
   A new Feature tab lets you track every association in the DIA identification process. This means more confidence and clarity in your results.
   
4. Deeper Discovery with Sequence Variants
   PEAKS 13 can detect novel peptides and sequence variants across species, offering new insight into the dark proteome.
   
5. Expanded Quantification Options
   Now supporting both Top3 and MaxLFQ, along with labeled and label-free quantification for PTMs, SPIDER, PRM, and more.
   
6. Tools for Targeted Proteomics
   A new Transition List Generator bridges the gap between discovery and targeted workflows. We’ve also added support for PRM PASEF and labeled PRM workflows.